Varaico: Literature-Extracted Genetic Variants

SQSTM1

1,685 papers

RefSeq Summary

This gene encodes a multifunctional protein that binds ubiquitin and regulates activation of the nuclear factor kappa-B (NF-kB) signaling pathway. The protein functions as a scaffolding/adaptor protei...

Pfam Domains

PB1aa 21–102UCSCPB1 domain

ZZaa 122–165UCSCZinc finger, ZZ type

UBA_5aa 379–440UCSCUBA domain

Gene Aliases

HGNC Name

sequestosome 1

HGNC Previous Symbols

PDB3; OSIL

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_003900.5

p.S283G

c.847A>G

Surrounding Variants

1 paper

NM_003900.5

p.S283T

c.848G>C

1 paper

NM_003900.5

p.Q285delFs

c.853delC

1 paper

NM_003900.5

p.K281Q

c.841A>C

3 papers

NM_003900.5

p.E280*

c.838G>T

1 paper

NM_003900.5

p.S287_S288insA

c.859_863ins3

9 papers

NM_003900.5

p.E280del1

c.838_839delGAG

5 papers

NM_003900.5

p.T278I

c.833C>T

1 paper

NM_003900.5

p.C289S

c.865T>A

2 papers

NM_003900.5

p.C289G

c.865T>G

1 paper

NM_003900.5

p.C289Y

c.866G>A

1 paper

NM_003900.5

p.C289S

c.866G>C

2 papers

NM_003900.5

p.C289*

c.867C>A