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Varaico: Literature-Extracted Genetic Variants

Include likely false extractions

Gene:ST7L

Variant:p.S187L

ST7L

50 papers

RefSeq Summary

This gene was identified by its similarity to the ST7 tumor suppressor gene found in the chromosome 7q31 region. This gene is clustered in a tail-to-tail manner with the WNT2B gene in a chromosomal re...

Pfam Domains

ST7aa 40–555UCSCST7 protein

Gene Aliases

HGNC Name

suppression of tumorigenicity 7 like

HGNC Alias Symbols

FLJ20284; STLR; ST7R; FAM4B

Papers

Position

RefSeq ID

Protein change

DNA change

Pfam

gnomAD

Selected Variant

1 paper

chr1:112598033 G>A

NM_017744.5

p.S187L

c.560C>T

ST7

exact variant not in gnomAD236 overlapping SVs

Surrounding Variants

1 paper

chr1:112597985 C>T

NM_017744.5

p.R203H

c.608G>A

ST7

Exome: 0.0% (AC=30, hom=0)Genome: 0.0% (AC=2, hom=0)236 overlapping SVs

2 papers

chr1:112600798 T>C

NM_017744.5

p.R168G

c.502A>G

ST7

Exome: 1.6% (AC=23663, hom=262)Genome: 1.4% (AC=2172, hom=28)236 overlapping SVs

2 papers

chr1:112600801 A>G

NM_017744.5

p.Y167H

c.499T>C

ST7

exact variant not in gnomAD236 overlapping SVs

1 paper

chr1:112600809 C>A

NM_017744.5

p.G164V

c.491G>T

ST7

Exome: 0.0% (AC=11, hom=1)Genome: 0.0% (AC=1, hom=0)236 overlapping SVs

1 paper

chr1:112600843 T>A

NM_017744.5

p.K153*

c.457A>T

ST7

exact variant not in gnomAD236 overlapping SVs

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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."