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Varaico: Literature-Extracted Genetic Variants

Include likely false extractions

Gene:TAF10

TAF10

26 papers

RefSeq Summary

Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to...

Pfam Domains

TAF10aa 116–217UCSCTranscription initiation factor TFIID 23-30kDa subunit

Gene Aliases

HGNC Name

TATA-box binding protein associated factor 10

HGNC Previous Symbols

TAF2H; TAF2A

Papers

Position

RefSeq ID

Protein change

DNA change

Pfam

gnomAD

1 paper

chr11:6612188 A>T

NM_006284.4

p.M1K

c.2T>A

Exome: 0.0% (AC=0, hom=0)Genome: n/a8 overlapping SVs

1 paper

chr11:6612158 T>C

NM_006284.4

p.E11G

c.32A>G

Exome: 0.0% (AC=343, hom=4)Genome: 0.1% (AC=102, hom=1)8 overlapping SVs

1 paper

chr11:6612147 C>T

NM_006284.4

p.A15T

c.43G>A

Exome: 0.0% (AC=5, hom=0)Genome: 0.0% (AC=3, hom=0)8 overlapping SVs

1 paper

chr11:6612089 G>A

NM_006284.4

p.P34L

c.101C>T

Exome: 0.0% (AC=1, hom=0)Genome: n/a8 overlapping SVs

1 paper

chr11:6611813 C>T

NM_006284.4

p.V80M

c.238G>A

exact variant not in gnomAD8 overlapping SVs

1 paper

chr11:6611802 A>C

NM_006284.4

p.G83G

c.249T>G

Exome: 0.0% (AC=23, hom=0)Genome: n/a8 overlapping SVs

1 paper

chr11:6611764 A>C

NM_006284.4

p.V96G

c.287T>G

Exome: 0.0% (AC=2, hom=0)Genome: n/a8 overlapping SVs

1 paper

chr11:6611694 G>A

NM_006284.4

p.F119F

c.357C>T

TAF10

Exome: 0.0% (AC=3, hom=0)Genome: n/a8 overlapping SVs

1 paper

chr11:6611449 G>A

NM_006284.4

p.P131S

c.391C>T

TAF10

exact variant not in gnomAD9 overlapping SVs

1 paper

chr11:6611191 T>G

NM_006284.4

p.K189Q

c.565A>C

TAF10

exact variant not in gnomAD8 overlapping SVs

1 paper

chr11:6611190 T>C

NM_006284.4

p.K189R

c.566A>G

TAF10

exact variant not in gnomAD8 overlapping SVs

1 paper

chr11:6610996 G>A

NM_006284.4

p.L195L

c.583C>T

TAF10

Exome: 0.0% (AC=19, hom=0)Genome: 0.0% (AC=1, hom=0)8 overlapping SVs

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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."