Varaico: Literature-Extracted Genetic Variants

TARDBP

2,553 papers

RefSeq Summary

HIV-1, the causative agent of acquired immunodeficiency syndrome (AIDS), contains an RNA genome that produces a chromosomally integrated DNA during the replicative cycle. Activation of HIV-1 gene expr...

Pfam Domains

TDP-43_Naa 4–77UCSCTAR DNA-binding protein 43, N-terminal domain

RRM_1aa 106–172UCSCRNA recognition motif

RRM_1aa 193–243UCSCRNA recognition motif

TDP-43_Caa 262–372UCSCTAR DNA-binding protein 43, C-terminal

Gene Aliases

HGNC Name

TAR DNA binding protein

HGNC Alias Symbols

TDP-43; ALS10

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

2 papers

NM_007375.4

p.G314A

c.941G>C

Surrounding Variants

5 papers

NM_007375.4

p.G314V

c.941G>T

700 papers

NM_007375.4

p.A315T

c.943G>A

2 papers

NM_007375.4

p.F313L

c.939T>A

2 papers

NM_007375.4

p.F313L

c.939T>G

71 papers

NM_007375.4

p.A315E

c.944C>A

1 paper

NM_007375.4

p.A315G

c.944C>G

1 paper

NM_007375.4

p.A315V

c.944C>T

1 paper

NM_007375.4

p.F313Y

c.938T>A

5 papers

NM_007375.4

p.A315A

c.945G>A

2 papers

NM_007375.4

p.F313L

c.937T>C

1 paper

NM_007375.4

p.N312S

c.935A>G

4 papers

NM_007375.4

p.S317C

c.949A>T