Varaico: Literature-Extracted Genetic Variants

TARDBP

2,553 papers

RefSeq Summary

HIV-1, the causative agent of acquired immunodeficiency syndrome (AIDS), contains an RNA genome that produces a chromosomally integrated DNA during the replicative cycle. Activation of HIV-1 gene expr...

Pfam Domains

TDP-43_Naa 4–77UCSCTAR DNA-binding protein 43, N-terminal domain

RRM_1aa 106–172UCSCRNA recognition motif

RRM_1aa 193–243UCSCRNA recognition motif

TDP-43_Caa 262–372UCSCTAR DNA-binding protein 43, C-terminal

Gene Aliases

HGNC Name

TAR DNA binding protein

HGNC Alias Symbols

TDP-43; ALS10

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_007375.4

p.G380A

c.1139G>C

Surrounding Variants

3 papers

NM_007375.4

p.A381T

c.1141G>A

42 papers

NM_007375.4

p.S379C

c.1136C>G

4 papers

NM_007375.4

p.A381V

c.1142C>T

43 papers

NM_007375.4

p.S379P

c.1135T>C

11 papers

NM_007375.4

p.S379A

c.1135T>G

325 papers

NM_007375.4

p.A382T

c.1144G>A

47 papers

NM_007375.4

p.A382P

c.1144G>C

1 paper

NM_007375.4

p.A382delFs

c.1145delC

23 papers

NM_007375.4

p.N378S

c.1133A>G

1 paper

NM_007375.4

p.A382_G392del0

c.1146_1175del30

51 papers

NM_007375.4

p.N378D

c.1132A>G

1 paper

NM_007375.4

p.A382A

c.1146A>G