Varaico: Literature-Extracted Genetic Variants

TAX1BP1

106 papers

RefSeq Summary

This gene encodes a HTLV-1 tax1 binding protein. The encoded protein interacts with TNFAIP3, and inhibits TNF-induced apoptosis by mediating the TNFAIP3 anti-apoptotic activity. Degradation of this pr...

Pfam Domains

SKICHaa 17–120UCSCSKICH domain

CALCOCO1aa 124–416UCSCCalcium binding and coiled-coil domain (CALCOCO1) like

Zn-C2H2_12aa 728–754UCSCAutophagy receptor zinc finger-C2H2 domain

Zn-C2H2_12aa 755–781UCSCAutophagy receptor zinc finger-C2H2 domain

Gene Aliases

HGNC Name

Tax1 binding protein 1

HGNC Alias Symbols

TXBP151; CALCOCO3

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_006024.7

p.S508A

c.1522T>G

Surrounding Variants

1 paper

NM_006024.7

p.D504N

c.1510G>A

1 paper

NM_006024.7

p.Q457R

c.1370A>G

1 paper

NM_006024.7

p.F453S

c.1358T>C

1 paper

NM_006024.7

p.D447H

c.1339G>C

1 paper

NM_006024.7

p.R441H

c.1322G>A

2 papers

NM_006024.7

p.T520A

c.1558A>G

1 paper

NM_006024.7

p.N539S

c.1616A>G

1 paper

NM_006024.7

p.N415_A416delFs

c.1245_1248del4

1 paper

NM_006024.7

p.E411D

c.1233A>C

1 paper

NM_006024.7

p.E411D

c.1233A>T

1 paper

NM_006024.7

p.E411Q

c.1231G>C

1 paper

NM_006024.7

p.A408V

c.1223C>T