Varaico: Literature-Extracted Genetic Variants

TAX1BP1

106 papers

RefSeq Summary

This gene encodes a HTLV-1 tax1 binding protein. The encoded protein interacts with TNFAIP3, and inhibits TNF-induced apoptosis by mediating the TNFAIP3 anti-apoptotic activity. Degradation of this pr...

Pfam Domains

SKICHaa 17–120UCSCSKICH domain

CALCOCO1aa 124–416UCSCCalcium binding and coiled-coil domain (CALCOCO1) like

Zn-C2H2_12aa 728–754UCSCAutophagy receptor zinc finger-C2H2 domain

Zn-C2H2_12aa 755–781UCSCAutophagy receptor zinc finger-C2H2 domain

Gene Aliases

HGNC Name

Tax1 binding protein 1

HGNC Alias Symbols

TXBP151; CALCOCO3

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

2 papers

NM_006024.7

p.S666A

c.1996T>G

Surrounding Variants

1 paper

NM_006024.7

p.G668V

c.2003G>T

1 paper

NM_006024.7

p.E670D

c.2010A>C

1 paper

NM_006024.7

p.E670D

c.2010A>T

1 paper

NM_006024.7

p.Q658delFs

c.1972_1973delCA

1 paper

NM_006024.7

p.R684W

c.2050C>T

1 paper

NM_006024.7

p.D686E

c.2058T>A

1 paper

NM_006024.7

p.D686E

c.2058T>G

1 paper

NM_006024.7

p.G687A

c.2060G>C

1 paper

NM_006024.7

p.K695_E696Splc

c.2085+103C>T

1 paper

NM_006024.7

p.R645T

c.1934G>C

1 paper

NM_006024.7

p.E618G

c.1853A>G

1 paper

NM_006024.7

p.S607A

c.1819T>G