Varaico: Literature-Extracted Genetic Variants

Gene:TET1
Variant:p.S879L

TET1

435 papers

RefSeq Summary

DNA methylation is an epigenetic mechanism that is important for controlling gene expression. The protein encoded by this gene is a demethylase that belongs to the TET (ten-eleven translocation) famil...

Pfam Domains

zf-CXXCaa 584–624UCSCCXXC zinc finger domain
Tet_JBPaa 1580–2052UCSCOxygenase domain of the 2OGFeDO superfamily

Gene Aliases

HGNC Name

tet methylcytosine dioxygenase 1

HGNC Previous Symbol

CXXC6

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
2 papers
NM_030625.3
p.S879L
c.2636C>T
Surrounding Variants
1 paper
NM_030625.3
p.L880F
c.2640A>C
1 paper
NM_030625.3
p.L880F
c.2640A>T
1 paper
NM_030625.3
p.M881V
c.2641A>G
1 paper
NM_030625.3
p.V873I
c.2617G>A
1 paper
NM_030625.3
p.V873F
c.2617G>T
1 paper
NM_030625.3
p.V892L
c.2674G>C
1 paper
NM_030625.3
p.V892L
c.2674G>T
1 paper
NM_030625.3
p.A893D
c.2678C>A
1 paper
NM_030625.3
p.E895delFs
c.2685delG
1 paper
NM_030625.3
p.A896D
c.2687C>A
1 paper
NM_030625.3
p.A896V
c.2687C>T
2 papers
NM_030625.3
p.P856Q
c.2567C>A
UCSC Genome Browser·Imprint·Privacy·Terms·Feedback·Email Updates·

Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."