Varaico: Literature-Extracted Genetic Variants

Gene:TET1
Variant:p.T1854A

TET1

435 papers

RefSeq Summary

DNA methylation is an epigenetic mechanism that is important for controlling gene expression. The protein encoded by this gene is a demethylase that belongs to the TET (ten-eleven translocation) famil...

Pfam Domains

zf-CXXCaa 584–624UCSCCXXC zinc finger domain
Tet_JBPaa 1580–2052UCSCOxygenase domain of the 2OGFeDO superfamily

Gene Aliases

HGNC Name

tet methylcytosine dioxygenase 1

HGNC Previous Symbol

CXXC6

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
1 paper
NM_030625.3
p.T1854A
c.5560A>G
Surrounding Variants
1 paper
NM_030625.3
p.S1856L
c.5567C>T
1 paper
NM_030625.3
p.G1847V
c.5540G>T
1 paper
NM_030625.3
p.P1861L
c.5582C>T
1 paper
NM_030625.3
p.A1866T
c.5596G>A
1 paper
NM_030625.3
p.H1839P
c.5516A>C
1 paper
NM_030625.3
p.S1869L
c.5606C>T
1 paper
NM_030625.3
p.G1871W
c.5611G>T
1 paper
NM_030625.3
p.S1836S
c.5508C>T
5 papers
NM_030625.3
p.P1835L
c.5504C>T
1 paper
NM_030625.3
p.L1833V
c.5497C>G
1 paper
NM_030625.3
p.S1832L
c.5495C>T
1 paper
NM_030625.3
p.T1878P
c.5632A>C
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