Varaico: Literature-Extracted Genetic Variants

Gene:TET2
Variant:p.S1559fs

TET2

2,192 papers

RefSeq Summary

The protein encoded by this gene is a methylcytosine dioxygenase that catalyzes the conversion of methylcytosine to 5-hydroxymethylcytosine. The encoded protein is involved in myelopoiesis, and defect...

Pfam Domains

Tet_JBPaa 1290–1905UCSCOxygenase domain of the 2OGFeDO superfamily

Gene Aliases

HGNC Name

tet methylcytosine dioxygenase 2

HGNC Previous Symbol

KIAA1546

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
1 paper
NM_001127208.3
p.S1559fs
c.4675_4676fs
Surrounding Variants
1 paper
NM_001127208.3
p.Y1560insFs
c.4678dupT
1 paper
NM_001127208.3
p.S1559_Y1560del2
c.4675_4679del6
1 paper
NM_001127208.3
p.N1558fs
c.4672_4673fs
2 papers
NM_001127208.3
p.Y1560insFs
c.4679dupA
5 papers
NM_001127208.3
p.Y1560fs
c.4678_4679fs
1 paper
NM_001127208.3
p.Y1560fs
c.4678_4679fs
1 paper
NM_001127208.3
p.Y1560insFs
c.4679_4680insT
5 papers
NM_001127208.3
p.Y1560*
c.4680T>A
2 papers
NM_001127208.3
p.V1557D
c.4670T>A
5 papers
NM_001127208.3
p.Y1560*
c.4680T>G
2 papers
NM_001127208.3
p.V1557fs
c.4669_4670fs
2 papers
NM_001127208.3
p.V1557fs
c.4669_4670fs
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."