Varaico: Literature-Extracted Genetic Variants

Gene:TET2
Variant:p.A1562_S1565del0

TET2

2,192 papers

RefSeq Summary

The protein encoded by this gene is a methylcytosine dioxygenase that catalyzes the conversion of methylcytosine to 5-hydroxymethylcytosine. The encoded protein is involved in myelopoiesis, and defect...

Pfam Domains

Tet_JBPaa 1290–1905UCSCOxygenase domain of the 2OGFeDO superfamily

Gene Aliases

HGNC Name

tet methylcytosine dioxygenase 2

HGNC Previous Symbol

KIAA1546

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
1 paper
NM_001127208.3
p.A1562_S1565del0
c.4686_4694del9
Surrounding Variants
1 paper
NM_001127208.3
p.A1562fs
c.4684_4685fs
1 paper
NM_001127208.3
p.A1562_T1566del0
c.4686_4697del12
1 paper
NM_001127208.3
p.S1561ins1
c.4682_4683insGCA
1 paper
NM_001127208.3
p.A1562_S1563insFs
c.4684_4687dup4
2 papers
NM_001127208.3
p.S1561C
c.4682C>G
1 paper
NM_001127208.3
p.S1561P
c.4681T>C
1 paper
NM_001127208.3
p.S1563fs
c.4687_4688fs
1 paper
NM_001127208.3
p.G1564_N1567del4
c.4690_4700del12
5 papers
NM_001127208.3
p.Y1560*
c.4680T>A
5 papers
NM_001127208.3
p.Y1560*
c.4680T>G
1 paper
NM_001127208.3
p.Y1560insFs
c.4679_4680insT
1 paper
NM_001127208.3
p.G1564_T1566del3
c.4690_4697del9
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."