Varaico: Literature-Extracted Genetic Variants

Gene:TET2
Variant:p.Y1659_S1668del0

TET2

2,192 papers

RefSeq Summary

The protein encoded by this gene is a methylcytosine dioxygenase that catalyzes the conversion of methylcytosine to 5-hydroxymethylcytosine. The encoded protein is involved in myelopoiesis, and defect...

Pfam Domains

Tet_JBPaa 1290–1905UCSCOxygenase domain of the 2OGFeDO superfamily

Gene Aliases

HGNC Name

tet methylcytosine dioxygenase 2

HGNC Previous Symbol

KIAA1546

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
1 paper
NM_001127208.3
p.Y1659_S1668del0
c.4977_5003del27
Surrounding Variants
4 papers
NM_001127208.3
p.Y1659*
c.4977T>A
4 papers
NM_001127208.3
p.Y1659*
c.4977T>G
1 paper
NM_001127208.3
p.Y1659fs
c.4975_4976fs
1 paper
NM_001127208.3
p.R1660_D1665delFs
c.4979_4994del16
1 paper
NM_001127208.3
p.R1660fs
c.4978_4979fs
1 paper
NM_001127208.3
p.R1660G
c.4978A>G
1 paper
NM_001127208.3
p.R1660delFs
c.4980delG
1 paper
NM_001127208.3
p.L1658_Y1659insFs
c.4974_4975insTA
1 paper
NM_001127208.3
p.L1658P
c.4973T>C
1 paper
NM_001127208.3
p.L1658delFs
c.4974delG
1 paper
NM_001127208.3
p.L1658fs
c.4972_4973fs
1 paper
NM_001127208.3
p.Y1661N
c.4981T>A
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."