Varaico: Literature-Extracted Genetic Variants

Gene:TET2
Variant:p.G1860R

TET2

2,192 papers

RefSeq Summary

The protein encoded by this gene is a methylcytosine dioxygenase that catalyzes the conversion of methylcytosine to 5-hydroxymethylcytosine. The encoded protein is involved in myelopoiesis, and defect...

Pfam Domains

Tet_JBPaa 1290–1905UCSCOxygenase domain of the 2OGFeDO superfamily

Gene Aliases

HGNC Name

tet methylcytosine dioxygenase 2

HGNC Previous Symbol

KIAA1546

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
1 paper
NM_001127208.3
p.G1860R
c.5578G>C
Surrounding Variants
1 paper
NM_001127208.3
p.G1860R
c.5578G>A
3 papers
NM_001127208.3
p.G1860fs
c.5578_5579fs
1 paper
NM_001127208.3
p.G1860W
c.5578G>T
1 paper
NM_001127208.3
p.G1860E
c.5579G>A
2 papers
NM_001127208.3
p.I1859M
c.5577T>G
1 paper
NM_001127208.3
p.G1860insFs
c.5578dupG
1 paper
NM_001127208.3
p.G1860_G1861insFs
c.5579_5582dup4
6 papers
NM_001127208.3
p.G1861delFs
c.5582delG
1 paper
NM_001127208.3
p.G1860_A1863delFs
c.5578_5587del10
1 paper
NM_001127208.3
p.I1859T
c.5576T>C
1 paper
NM_001127208.3
p.I1859fs
c.5575_5576fs
2 papers
NM_001127208.3
p.I1859insFs
c.5575_5576insT
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."