Varaico: Literature-Extracted Genetic Variants

TIGD1

24 papers

RefSeq Summary

The protein encoded by this gene belongs to the tigger subfamily of the pogo superfamily of DNA-mediated transposons in humans. These proteins are related to DNA transposons found in fungi and nematod...

Pfam Domains

CENP-B_Naa 9–61UCSCCENP-B N-terminal DNA-binding domain

HTH_Tnp_Tc5aa 79–151UCSCTc5 transposase DNA-binding domain

DDE_1aa 216–403UCSCDDE superfamily endonuclease

Gene Aliases

HGNC Name

tigger transposable element derived 1

HGNC Alias Symbol

EEYORE

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_145702.4

p.V122E

c.365T>A

Surrounding Variants

1 paper

NM_145702.4

p.E123K

c.367G>A

1 paper

NM_145702.4

p.F129L

c.385T>C

1 paper

NM_145702.4

p.F129L

c.387T>G

1 paper

NM_145702.4

p.F129L

c.387T>A

1 paper

NM_145702.4

p.R138S

c.414G>T

1 paper

NM_145702.4

p.R138S

c.414G>C

1 paper

NM_145702.4

p.F145L

c.433T>C

1 paper

NM_145702.4

p.F145L

c.435C>G

1 paper

NM_145702.4

p.F145L

c.435C>A

1 paper

NM_145702.4

p.I148V

c.442A>G

1 paper

NM_145702.4

p.A150V

c.449C>T

1 paper

NM_145702.4

p.A157V

c.470C>T