Varaico: Literature-Extracted Genetic Variants

TIGD5

25 papers

RefSeq Summary

The protein encoded by this gene belongs to the tigger subfamily of the pogo superfamily of DNA-mediated transposons in humans. These proteins are related to DNA transposons found in fungi and nematod...

Pfam Domains

CENP-B_Naa 53–102UCSCCENP-B N-terminal DNA-binding domain

HTH_Tnp_Tc5aa 121–185UCSCTc5 transposase DNA-binding domain

DDE_1aa 272–376UCSCDDE superfamily endonuclease

Gene Aliases

HGNC Name

tigger transposable element derived 5

HGNC Alias Symbol

FLJ14926

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_032862.5

p.L613M

c.1837C>A

Surrounding Variants

1 paper

NM_032862.5

p.R619C

c.1855C>T

1 paper

NM_032862.5

p.S623N

c.1868G>A

1 paper

NM_032862.5

p.G630fs

c.1888_1889fs

2 papers

NM_032862.5

p.M568I

c.1704G>A

2 papers

NM_032862.5

p.M568I

c.1704G>C

2 papers

NM_032862.5

p.M568I

c.1704G>T

1 paper

NM_032862.5

p.S493T

c.1478G>C

1 paper

NM_032862.5

p.G462G

c.1386C>T

1 paper

NM_032862.5

p.Q427K

c.1279C>A

1 paper

NM_032862.5

p.V421L

c.1261G>C

1 paper

NM_032862.5

p.V421L

c.1261G>T

1 paper

NM_032862.5

p.S364fs

c.1090_1091fs