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Varaico: Literature-Extracted Genetic Variants

Include likely false extractions

Gene:TRDMT1

Variant:p.G12S

TRDMT1

58 papers

RefSeq Summary

This gene encodes a protein responsible for the methylation of aspartic acid transfer RNA, specifically at the cytosine-38 residue in the anticodon loop. This enzyme also possesses residual DNA-(cytos...

Pfam Domains

DNA_methylaseaa 4–391UCSCC-5 cytosine-specific DNA methylase

Gene Aliases

HGNC Name

tRNA aspartic acid methyltransferase 1

HGNC Previous Symbol

DNMT2

Papers

Position

RefSeq ID

Protein change

DNA change

Pfam

gnomAD

Selected Variant

1 paper

chr10:17201601 C>T

NM_004412.7

p.G12S

c.34G>A

DNA_methylase

Exome: 0.0% (AC=1, hom=0)Genome: 0.0% (AC=2, hom=0)14 overlapping SVs

Surrounding Variants

1 paper

chr10:17201601 C>G

NM_004412.7

p.G12R

c.34G>C

DNA_methylase

exact variant not in gnomAD14 overlapping SVs

1 paper

chr10:17201599 G>C

NM_004412.7

p.G12G

c.36C>G

DNA_methylase

exact variant not in gnomAD14 overlapping SVs

1 paper

chr10:17201599 G>T

NM_004412.7

p.G12G

c.36C>A

DNA_methylase

Exome: 0.0% (AC=3, hom=0)Genome: n/a14 overlapping SVs

1 paper

chr10:17201612 T>G

NM_004412.7

p.E8A

c.23A>C

DNA_methylase

exact variant not in gnomAD14 overlapping SVs

1 paper

chr10:17201631 C>T

NM_004412.7

p.E2K

c.4G>A

Exome: 0.0% (AC=1, hom=0)Genome: n/a14 overlapping SVs

1 paper

chr10:17201569 A>T

NM_004412.7

p.E22Splc

c.64+2T>A

exact variant not in gnomAD14 overlapping SVs

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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."