Varaico: Literature-Extracted Genetic Variants

TRIM28

239 papers

RefSeq Summary

The protein encoded by this gene mediates transcriptional control by interaction with the Kruppel-associated box repression domain found in many transcription factors. The protein localizes to the nuc...

Pfam Domains

zf-RING_5aa 64–122UCSCzinc-RING finger domain

zf-B_boxaa 148–195UCSCB-box zinc finger

zf-B_boxaa 204–245UCSCB-box zinc finger

PHDaa 628–669UCSCPHD-finger

Gene Aliases

HGNC Name

tripartite motif containing 28

HGNC Alias Symbols

TIF1B; KAP1; TF1B; RNF96; PPP1R157; KAP-1; TIF1-beta; TIF1beta

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_005762.3

p.A56T

c.166G>A

Surrounding Variants

2 papers

NM_005762.3

p.L59delFs

c.175delC

4 papers

NM_005762.3

p.L59fs

c.175_176fs

1 paper

NM_005762.3

p.E60K

c.178G>A

1 paper

NM_005762.3

p.E60*

c.178G>T

1 paper

NM_005762.3

p.L61L

c.181C>T

1 paper

NM_005762.3

p.S50fs

c.148_149fs

1 paper

NM_005762.3

p.S49L

c.146C>T

1 paper

NM_005762.3

p.S49fs

c.145_146fs

1 paper

NM_005762.3

p.A47V

c.140C>T

1 paper

NM_005762.3

p.A47T

c.139G>A

1 paper

NM_005762.3

p.A47S

c.139G>T

1 paper

NM_005762.3

p.C65R

c.193T>C