Varaico: Literature-Extracted Genetic Variants

TRIM28

239 papers

RefSeq Summary

The protein encoded by this gene mediates transcriptional control by interaction with the Kruppel-associated box repression domain found in many transcription factors. The protein localizes to the nuc...

Pfam Domains

zf-RING_5aa 64–122UCSCzinc-RING finger domain

zf-B_boxaa 148–195UCSCB-box zinc finger

zf-B_boxaa 204–245UCSCB-box zinc finger

PHDaa 628–669UCSCPHD-finger

Gene Aliases

HGNC Name

tripartite motif containing 28

HGNC Alias Symbols

TIF1B; KAP1; TF1B; RNF96; PPP1R157; KAP-1; TIF1-beta; TIF1beta

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_005762.3

p.G93A

c.278G>C

Surrounding Variants

1 paper

NM_005762.3

p.L92I

c.274T>A

1 paper

NM_005762.3

p.C91W

c.273C>G

1 paper

NM_005762.3

p.A95V

c.284C>T

1 paper

NM_005762.3

p.A90D

c.269C>A

1 paper

NM_005762.3

p.A90V

c.269C>T

1 paper

NM_005762.3

p.A99V

c.296C>T

3 papers

NM_005762.3

p.C83fs

c.247_248fs

2 papers

NM_005762.3

p.P82_C83delFs

c.246_247delCT

1 paper

NM_005762.3

p.G104E

c.311G>A

1 paper

NM_005762.3

p.G104G

c.312G>C

2 papers

NM_005762.3

p.D105fs

c.313_314fs

1 paper

NM_005762.3

p.G106fs

c.316_317fs