Varaico: Literature-Extracted Genetic Variants

TRIM28

239 papers

RefSeq Summary

The protein encoded by this gene mediates transcriptional control by interaction with the Kruppel-associated box repression domain found in many transcription factors. The protein localizes to the nuc...

Pfam Domains

zf-RING_5aa 64–122UCSCzinc-RING finger domain

zf-B_boxaa 148–195UCSCB-box zinc finger

zf-B_boxaa 204–245UCSCB-box zinc finger

PHDaa 628–669UCSCPHD-finger

Gene Aliases

HGNC Name

tripartite motif containing 28

HGNC Alias Symbols

TIF1B; KAP1; TF1B; RNF96; PPP1R157; KAP-1; TIF1-beta; TIF1beta

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

2 papers

NM_005762.3

p.S501R

c.1501A>C

Surrounding Variants

2 papers

NM_005762.3

p.S501R

c.1503C>A

2 papers

NM_005762.3

p.S501R

c.1503C>G

1 paper

NM_005762.3

p.Q502*

c.1504C>T

1 paper

NM_005762.3

p.D496N

c.1486G>A

1 paper

NM_005762.3

p.V508L

c.1522G>C

1 paper

NM_005762.3

p.V508G

c.1523T>G

1 paper

NM_005762.3

p.E491D

c.1473A>C

1 paper

NM_005762.3

p.E491D

c.1473A>T

1 paper

NM_005762.3

p.S512fs

c.1534_1535fs

2 papers

NM_005762.3

p.V488E

c.1463T>A

2 papers

NM_005762.3

p.V488A

c.1463T>C

1 paper

NM_005762.3

p.V488L

c.1462G>T