Varaico: Literature-Extracted Genetic Variants

Gene:TRIM42
Variant:p.A271V

TRIM42

78 papers

RefSeq Summary

This gene encodes a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, namely a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. [provi...

Pfam Domains

zf-B_boxaa 285–326UCSCB-box zinc finger
fn3aa 612–697UCSCFibronectin type III domain

Gene Aliases

HGNC Name

tripartite motif containing 42

HGNC Alias Symbols

FLJ40097; PPP1R40; T4A1

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
1 paper
NM_152616.5
p.A271V
c.812C>T
Surrounding Variants
1 paper
NM_152616.5
p.E283V
c.848A>T
1 paper
NM_152616.5
p.D286Y
c.856G>T
1 paper
NM_152616.5
p.A247T
c.739G>A
2 papers
NM_152616.5
p.K244R
c.731A>G
1 paper
NM_152616.5
p.N243I
c.728A>T
1 paper
NM_152616.5
p.E300_Y301ins4
c.898_902ins12
1 paper
NM_152616.5
p.Y301S
c.902A>C
1 paper
NM_152616.5
p.G234W
c.700G>T
1 paper
NM_152616.5
p.D230H
c.688G>C
1 paper
NM_152616.5
p.G223S
c.667G>A
1 paper
NM_152616.5
p.G212R
c.634G>A
1 paper
NM_152616.5
p.G212R
c.634G>C
UCSC Genome Browser·Imprint·Privacy·Terms·Feedback·Email Updates·

Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."