Varaico: Literature-Extracted Genetic Variants

Gene:TRIM5
Variant:p.N390fs

TRIM5

152 papers

RefSeq Summary

The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil reg...

Pfam Domains

zf-RING_UBOXaa 15–56UCSCRING-type zinc-finger
zf-B_boxaa 90–131UCSCB-box zinc finger
SPRYaa 358–491UCSCSPRY domain

Gene Aliases

HGNC Name

tripartite motif containing 5

HGNC Alias Symbols

RNF88; TRIM5alpha

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
1 paper
NM_033034.3
p.N390fs
c.1168_1169fs
Surrounding Variants
1 paper
NM_033034.3
p.Y397N
c.1189T>A
1 paper
NM_033034.3
p.P381P
c.1143T>G
1 paper
NM_033034.3
p.T369S
c.1106C>G
1 paper
NM_033034.3
p.T369S
c.1105A>T
1 paper
NM_033034.3
p.V365M
c.1093G>A
10 papers
NM_033034.3
p.H419Y
c.1255C>T
2 papers
NM_033034.3
p.V423F
c.1267G>T
1 paper
NM_033034.3
p.V427M
c.1279G>A
1 paper
NM_033034.3
p.L349R
c.1046T>G
1 paper
NM_033034.3
p.I348V
c.1042A>G
1 paper
NM_033034.3
p.D436E
c.1308T>G
1 paper
NM_033034.3
p.D436E
c.1308T>A
UCSC Genome Browser·Imprint·Privacy·Terms·Feedback·Email Updates·

Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."