Varaico: Literature-Extracted Genetic Variants

TRIM71

102 papers

RefSeq Summary

The protein encoded by this gene is an E3 ubiquitin-protein ligase that binds with miRNAs and maintains the growth and upkeep of embryonic stem cells. This gene also is involved in the G1-S phase tran...

Pfam Domains

zf-C3HC4aa 50–94UCSCZinc finger, C3HC4 type (RING finger)

zf-B_boxaa 273–314UCSCB-box zinc finger

Filaminaa 481–577UCSCFilamin/ABP280 repeat

NHLaa 606–633UCSCNHL repeat

NHLaa 653–680UCSCNHL repeat

NHLaa 700–727UCSCNHL repeat

Gene Aliases

HGNC Name

tripartite motif containing 71

HGNC Alias Symbols

LIN41; LIN-41

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_001039111.3

p.L25F

c.73C>T

Surrounding Variants

1 paper

NM_001039111.3

p.A23P

c.67G>C

1 paper

NM_001039111.3

p.S21_P22insFs

c.63_64insCT

1 paper

NM_001039111.3

p.S21insFs

c.61_62insCC

1 paper

NM_001039111.3

p.G20insFs

c.59_60insCA

1 paper

NM_001039111.3

p.G20insFs

c.58_59insTT

1 paper

NM_001039111.3

p.C19_G20insFs

c.57_58insCG

1 paper

NM_001039111.3

p.C19insFs

c.55_56insCC

1 paper

NM_001039111.3

p.M18insFs

c.52_53insTT

1 paper

NM_001039111.3

p.E17insFs

c.49_50insCA

1 paper

NM_001039111.3

p.K16insFs

c.47_48insCC

1 paper

NM_001039111.3

p.C15G

c.43T>G

1 paper

NM_001039111.3

p.L14_C15insFs

c.42_43insTC