Varaico: Literature-Extracted Genetic Variants

TRIM71

102 papers

RefSeq Summary

The protein encoded by this gene is an E3 ubiquitin-protein ligase that binds with miRNAs and maintains the growth and upkeep of embryonic stem cells. This gene also is involved in the G1-S phase tran...

Pfam Domains

zf-C3HC4aa 50–94UCSCZinc finger, C3HC4 type (RING finger)

zf-B_boxaa 273–314UCSCB-box zinc finger

Filaminaa 481–577UCSCFilamin/ABP280 repeat

NHLaa 606–633UCSCNHL repeat

NHLaa 653–680UCSCNHL repeat

NHLaa 700–727UCSCNHL repeat

Gene Aliases

HGNC Name

tripartite motif containing 71

HGNC Alias Symbols

LIN41; LIN-41

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_001039111.3

p.F65S

c.194T>C

Surrounding Variants

1 paper

NM_001039111.3

p.L75_G80insFs

c.224_240dup17

1 paper

NM_001039111.3

p.R74W

c.220C>T

1 paper

NM_001039111.3

p.G79_G81insFs

c.236_242dup7

1 paper

NM_001039111.3

p.A53G

c.158C>G

1 paper

NM_001039111.3

p.G79fs

c.235_236fs

1 paper

NM_001039111.3

p.G81fs

c.241_242fs

1 paper

NM_001039111.3

p.A82fs

c.244_245fs

1 paper

NM_001039111.3

p.A83V

c.248C>T

1 paper

NM_001039111.3

p.S42delFs

c.126delG

2 papers

NM_001039111.3

p.K88K

c.264G>A

1 paper

NM_001039111.3

p.S42fs

c.124_125fs

1 paper

NM_001039111.3

p.E102A

c.305A>C