Varaico: Literature-Extracted Genetic Variants

USH2A

1,687 papers

RefSeq Summary

This gene encodes a protein that contains laminin EGF motifs, a pentaxin domain, and many fibronectin type III motifs. The protein is found in the basement membrane, and may be important in developmen...

Pfam Domains

Laminin_G_3aa 130–286UCSCConcanavalin A-like lectin/glucanases superfamily

Laminin_Naa 293–516UCSCLaminin N-terminal (Domain VI)

EGF_lamininaa 518–566UCSCLaminin EGF domain

EGF_lamininaa 575–634UCSCLaminin EGF domain

EGF_lamininaa 641–691UCSCLaminin EGF domain

EGF_lamininaa 694–744UCSCLaminin EGF domain

Gene Aliases

HGNC Name

usherin

HGNC Previous Symbol

USH2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_206933.4

p.E901K

c.2701G>A

Surrounding Variants

2 papers

NM_206933.4

p.E901*

c.2701G>T

1 paper

NM_206933.4

p.C900S

c.2699G>C

1 paper

NM_206933.4

p.C900Y

c.2699G>A

1 paper

NM_206933.4

p.C900S

c.2698T>A

1 paper

NM_206933.4

p.C902Y

c.2705G>A

1 paper

NM_206933.4

p.M899R

c.2696T>G

1 paper

NM_206933.4

p.D903Y

c.2707G>T

1 paper

NM_206933.4

p.M899L

c.2695A>T

1 paper

NM_206933.4

p.M899V

c.2695A>G

1 paper

NM_206933.4

p.M899L

c.2695A>C

1 paper

NM_206933.4

p.Q898Q

c.2694G>A

1 paper

NM_206933.4

p.Q898*

c.2692C>T