Varaico: Literature-Extracted Genetic Variants

USH2A

1,687 papers

RefSeq Summary

This gene encodes a protein that contains laminin EGF motifs, a pentaxin domain, and many fibronectin type III motifs. The protein is found in the basement membrane, and may be important in developmen...

Pfam Domains

Laminin_G_3aa 130–286UCSCConcanavalin A-like lectin/glucanases superfamily

Laminin_Naa 293–516UCSCLaminin N-terminal (Domain VI)

EGF_lamininaa 518–566UCSCLaminin EGF domain

EGF_lamininaa 575–634UCSCLaminin EGF domain

EGF_lamininaa 641–691UCSCLaminin EGF domain

EGF_lamininaa 694–744UCSCLaminin EGF domain

Gene Aliases

HGNC Name

usherin

HGNC Previous Symbol

USH2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_206933.4

p.Y835F

c.2504A>T

Surrounding Variants

1 paper

NM_206933.4

p.L836V

c.2506C>G

1 paper

NM_206933.4

p.L836I

c.2506C>A

1 paper

NM_206933.4

p.F834delFs

c.2501delA

3 papers

NM_206933.4

p.R837W

c.2509C>T

2 papers

NM_206933.4

p.R837Q

c.2510G>A

1 paper

NM_206933.4

p.N833D

c.2497A>G

3 papers

NM_206933.4

p.Q838*

c.2512C>T

1 paper

NM_206933.4

p.Q838K

c.2512C>A

1 paper

NM_206933.4

p.E831_G832delins

c.2493_2495delinsGGC

1 paper

NM_206933.4

p.E831V

c.2492A>T

1 paper

NM_206933.4

p.E831*

c.2491G>T

1 paper

NM_206933.4

p.E831Q

c.2491G>C