Varaico: Literature-Extracted Genetic Variants

VCAM1

391 papers

RefSeq Summary

This gene is a member of the Ig superfamily and encodes a cell surface sialoglycoprotein expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell a...

Pfam Domains

I-setaa 25–112UCSCImmunoglobulin I-set domain

C2-setaa 133–221UCSCImmunoglobulin C2-set domain

igaa 232–304UCSCImmunoglobulin domain

I-setaa 313–400UCSCImmunoglobulin I-set domain

C2-setaa 421–509UCSCImmunoglobulin C2-set domain

Ig_3aa 514–583UCSCImmunoglobulin domain

Gene Aliases

HGNC Name

vascular cell adhesion molecule 1

HGNC Alias Symbol

CD106

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_001078.4

p.R147W

c.439A>T

Surrounding Variants

2 papers

NM_001078.4

p.E149A

c.446A>C

1 paper

NM_001078.4

p.P144R

c.431C>G

2 papers

NM_001078.4

p.I150L

c.448A>C

2 papers

NM_001078.4

p.I150L

c.448A>T

1 paper

NM_001078.4

p.V142A

c.425T>C

1 paper

NM_001078.4

p.L153V

c.457C>G

1 paper

NM_001078.4

p.D156A

c.467A>C

1 paper

NM_001078.4

p.M159T

c.476T>C

1 paper

NM_001078.4

p.M159R

c.476T>G

1 paper

NM_001078.4

p.Q162insFs

c.485_486insT

1 paper

NM_001078.4

p.G130R

c.388G>A

1 paper

NM_001078.4

p.G130R

c.388G>C