Varaico: Literature-Extracted Genetic Variants

VCAM1

391 papers

RefSeq Summary

This gene is a member of the Ig superfamily and encodes a cell surface sialoglycoprotein expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell a...

Pfam Domains

I-setaa 25–112UCSCImmunoglobulin I-set domain

C2-setaa 133–221UCSCImmunoglobulin C2-set domain

igaa 232–304UCSCImmunoglobulin domain

I-setaa 313–400UCSCImmunoglobulin I-set domain

C2-setaa 421–509UCSCImmunoglobulin C2-set domain

Ig_3aa 514–583UCSCImmunoglobulin domain

Gene Aliases

HGNC Name

vascular cell adhesion molecule 1

HGNC Alias Symbol

CD106

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_001078.4

p.G714R

c.2140G>C

Surrounding Variants

1 paper

NM_001078.4

p.G714R

c.2140G>A

4 papers

NM_001078.4

p.I716L

c.2146A>C

4 papers

NM_001078.4

p.I716L

c.2146A>T

1 paper

NM_001078.4

p.S728S

c.2184A>G

1 paper

NM_001078.4

p.V732I

c.2194G>A

2 papers

NM_001078.4

p.D693D

c.2079C>T

1 paper

NM_001078.4

p.G687Splc

c.2060-284A>T

1 paper

NM_001078.4

p.G687Splc

c.2060-1457A>G

1 paper

NM_001078.4

p.G687Splc

c.2059+823T>A

1 paper

NM_001078.4

p.L683P

c.2048T>C

1 paper

NM_001078.4

p.E667K

c.1999G>A

1 paper

NM_001078.4

p.K657E

c.1969A>G