Varaico: Literature-Extracted Genetic Variants

VCAN

394 papers

RefSeq Summary

This gene is a member of the aggrecan/versican proteoglycan family. The protein encoded is a large chondroitin sulfate proteoglycan and is a major component of the extracellular matrix. This protein i...

Pfam Domains

V-setaa 27–148UCSCImmunoglobulin V-set domain

Xlinkaa 150–244UCSCExtracellular link domain

Xlinkaa 251–346UCSCExtracellular link domain

EGFaa 3093–3123UCSCEGF-like domain

EGFaa 3131–3161UCSCEGF-like domain

Lectin_Caa 3186–3291UCSCLectin C-type domain

Gene Aliases

HGNC Name

versican

HGNC Previous Symbol

CSPG2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

2 papers

NM_004385.5

p.T379I

c.1136C>T

Surrounding Variants

1 paper

NM_004385.5

p.V374I

c.1120G>A

1 paper

NM_004385.5

p.E387K

c.1159G>A

1 paper

NM_004385.5

p.E387ins1

c.1160_1161insTTT

1 paper

NM_004385.5

p.E370_V385del0

c.1110_1154del45

1 paper

NM_004385.5

p.V390G

c.1169T>G

1 paper

NM_004385.5

p.E394_F395del2

c.1180_1184del6

1 paper

NM_004385.5

p.E361Q

c.1081G>C

1 paper

NM_004385.5

p.L359L

c.1077C>T

1 paper

NM_004385.5

p.S403R

c.1209T>A

1 paper

NM_004385.5

p.I354I

c.1062C>T

4 papers

NM_004385.5

p.K349E

c.1045A>G

1 paper

NM_004385.5

p.Q411E

c.1231C>G