Varaico: Literature-Extracted Genetic Variants

VCAN

394 papers

RefSeq Summary

This gene is a member of the aggrecan/versican proteoglycan family. The protein encoded is a large chondroitin sulfate proteoglycan and is a major component of the extracellular matrix. This protein i...

Pfam Domains

V-setaa 27–148UCSCImmunoglobulin V-set domain

Xlinkaa 150–244UCSCExtracellular link domain

Xlinkaa 251–346UCSCExtracellular link domain

EGFaa 3093–3123UCSCEGF-like domain

EGFaa 3131–3161UCSCEGF-like domain

Lectin_Caa 3186–3291UCSCLectin C-type domain

Gene Aliases

HGNC Name

versican

HGNC Previous Symbol

CSPG2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_004385.5

p.V536V

c.1608A>G

Surrounding Variants

1 paper

NM_004385.5

p.K534*

c.1600A>T

1 paper

NM_004385.5

p.V543L

c.1627G>C

1 paper

NM_004385.5

p.V543L

c.1627G>T

1 paper

NM_004385.5

p.E528G

c.1583A>G

1 paper

NM_004385.5

p.Y548C

c.1643A>G

1 paper

NM_004385.5

p.G549E

c.1646G>A

1 paper

NM_004385.5

p.A523V

c.1568C>T

1 paper

NM_004385.5

p.D556_D557delFs

c.1666_1669del4

1 paper

NM_004385.5

p.D557Y

c.1669G>T

1 paper

NM_004385.5

p.D557G

c.1670A>G

1 paper

NM_004385.5

p.D559N

c.1675G>A

1 paper

NM_004385.5

p.D559E

c.1677C>A