Varaico: Literature-Extracted Genetic Variants

VCAN

394 papers

RefSeq Summary

This gene is a member of the aggrecan/versican proteoglycan family. The protein encoded is a large chondroitin sulfate proteoglycan and is a major component of the extracellular matrix. This protein i...

Pfam Domains

V-setaa 27–148UCSCImmunoglobulin V-set domain

Xlinkaa 150–244UCSCExtracellular link domain

Xlinkaa 251–346UCSCExtracellular link domain

EGFaa 3093–3123UCSCEGF-like domain

EGFaa 3131–3161UCSCEGF-like domain

Lectin_Caa 3186–3291UCSCLectin C-type domain

Gene Aliases

HGNC Name

versican

HGNC Previous Symbol

CSPG2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_004385.5

p.Q942*

c.2824C>T

Surrounding Variants

2 papers

NM_004385.5

p.A944S

c.2830G>T

1 paper

NM_004385.5

p.H945R

c.2834A>G

1 paper

NM_004385.5

p.D930V

c.2789A>T

1 paper

NM_004385.5

p.F954L

c.2860T>C

1 paper

NM_004385.5

p.F954L

c.2862T>A

1 paper

NM_004385.5

p.F954L

c.2862T>G

1 paper

NM_004385.5

p.S956R

c.2866A>C

1 paper

NM_004385.5

p.S956T

c.2867G>C

1 paper

NM_004385.5

p.S956R

c.2868T>A

1 paper

NM_004385.5

p.S956R

c.2868T>G

1 paper

NM_004385.5

p.S959R

c.2875A>C

2 papers

NM_004385.5

p.S959C

c.2875A>T