Varaico: Literature-Extracted Genetic Variants

VCAN

394 papers

RefSeq Summary

This gene is a member of the aggrecan/versican proteoglycan family. The protein encoded is a large chondroitin sulfate proteoglycan and is a major component of the extracellular matrix. This protein i...

Pfam Domains

V-setaa 27–148UCSCImmunoglobulin V-set domain

Xlinkaa 150–244UCSCExtracellular link domain

Xlinkaa 251–346UCSCExtracellular link domain

EGFaa 3093–3123UCSCEGF-like domain

EGFaa 3131–3161UCSCEGF-like domain

Lectin_Caa 3186–3291UCSCLectin C-type domain

Gene Aliases

HGNC Name

versican

HGNC Previous Symbol

CSPG2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_004385.5

p.H1257Y

c.3769C>T

Surrounding Variants

3 papers

NM_004385.5

p.S1254S

c.3762A>G

1 paper

NM_004385.5

p.D1247N

c.3739G>A

1 paper

NM_004385.5

p.L1235F

c.3703C>T

1 paper

NM_004385.5

p.T1281M

c.3842C>T

1 paper

NM_004385.5

p.S1227Y

c.3680C>A

1 paper

NM_004385.5

p.T1209I

c.3626C>T

1 paper

NM_004385.5

p.A1306G

c.3917C>G

1 paper

NM_004385.5

p.S1308C

c.3923C>G

3 papers

NM_004385.5

p.T1309M

c.3926C>T

1 paper

NM_004385.5

p.I1199I

c.3597C>T

1 paper

NM_004385.5

p.F1318_D1321del0

c.3954_3962del9

1 paper

NM_004385.5

p.H1319L

c.3956A>T