Varaico: Literature-Extracted Genetic Variants

VCAN

394 papers

RefSeq Summary

This gene is a member of the aggrecan/versican proteoglycan family. The protein encoded is a large chondroitin sulfate proteoglycan and is a major component of the extracellular matrix. This protein i...

Pfam Domains

V-setaa 27–148UCSCImmunoglobulin V-set domain

Xlinkaa 150–244UCSCExtracellular link domain

Xlinkaa 251–346UCSCExtracellular link domain

EGFaa 3093–3123UCSCEGF-like domain

EGFaa 3131–3161UCSCEGF-like domain

Lectin_Caa 3186–3291UCSCLectin C-type domain

Gene Aliases

HGNC Name

versican

HGNC Previous Symbol

CSPG2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_004385.5

p.A1426P

c.4276G>C

Surrounding Variants

1 paper

NM_004385.5

p.A1438T

c.4312G>A

1 paper

NM_004385.5

p.S1440_Q1441del2

c.4318_4322del6

1 paper

NM_004385.5

p.S1440F

c.4319C>T

3 papers

NM_004385.5

p.Q1441Q

c.4323G>A

1 paper

NM_004385.5

p.F1443L

c.4327T>C

1 paper

NM_004385.5

p.F1443L

c.4329C>A

1 paper

NM_004385.5

p.F1443L

c.4329C>G

1 paper

NM_004385.5

p.S1444S

c.4332G>T

1 paper

NM_004385.5

p.D1450N

c.4348G>A

1 paper

NM_004385.5

p.T1400N

c.4199C>A

1 paper

NM_004385.5

p.A1397E

c.4190C>A

1 paper

NM_004385.5

p.E1395del1

c.4183_4184delGAG