Varaico: Literature-Extracted Genetic Variants

VCAN

394 papers

RefSeq Summary

This gene is a member of the aggrecan/versican proteoglycan family. The protein encoded is a large chondroitin sulfate proteoglycan and is a major component of the extracellular matrix. This protein i...

Pfam Domains

V-setaa 27–148UCSCImmunoglobulin V-set domain

Xlinkaa 150–244UCSCExtracellular link domain

Xlinkaa 251–346UCSCExtracellular link domain

EGFaa 3093–3123UCSCEGF-like domain

EGFaa 3131–3161UCSCEGF-like domain

Lectin_Caa 3186–3291UCSCLectin C-type domain

Gene Aliases

HGNC Name

versican

HGNC Previous Symbol

CSPG2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

9 papers

NM_004385.5

p.R1826H

c.5477G>A

Surrounding Variants

1 paper

NM_004385.5

p.E1834Q

c.5500G>C

1 paper

NM_004385.5

p.G1838G

c.5514A>G

1 paper

NM_004385.5

p.E1845*

c.5533G>T

1 paper

NM_004385.5

p.E1857D

c.5571G>C

1 paper

NM_004385.5

p.E1857D

c.5571G>T

1 paper

NM_004385.5

p.A1859E

c.5576C>A

1 paper

NM_004385.5

p.A1862A

c.5586C>T

1 paper

NM_004385.5

p.G1868S

c.5602G>A

1 paper

NM_004385.5

p.R1784R

c.5350A>C

1 paper

NM_004385.5

p.E1783Q

c.5347G>C

1 paper

NM_004385.5

p.P1872L

c.5615C>T

1 paper

NM_004385.5

p.H1873Y

c.5617C>T