Varaico: Literature-Extracted Genetic Variants

VCAN

394 papers

RefSeq Summary

This gene is a member of the aggrecan/versican proteoglycan family. The protein encoded is a large chondroitin sulfate proteoglycan and is a major component of the extracellular matrix. This protein i...

Pfam Domains

V-setaa 27–148UCSCImmunoglobulin V-set domain

Xlinkaa 150–244UCSCExtracellular link domain

Xlinkaa 251–346UCSCExtracellular link domain

EGFaa 3093–3123UCSCEGF-like domain

EGFaa 3131–3161UCSCEGF-like domain

Lectin_Caa 3186–3291UCSCLectin C-type domain

Gene Aliases

HGNC Name

versican

HGNC Previous Symbol

CSPG2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_004385.5

p.I2244V

c.6730A>G

Surrounding Variants

1 paper

NM_004385.5

p.T2243R

c.6728C>G

2 papers

NM_004385.5

p.T2243A

c.6727A>G

5 papers

NM_004385.5

p.R2241R

c.6723A>G

1 paper

NM_001164097.2

p.L1269P

c.3806T>C

NM_004385.5

p.L2256P

c.6767T>C

1 paper

NM_004385.5

p.I2216L

c.6646A>C

1 paper

NM_004385.5

p.I2216L

c.6646A>T

1 paper

NM_004385.5

p.A2208V

c.6623C>T

1 paper

NM_004385.5

p.A2208S

c.6622G>T

1 paper

NM_004385.5

p.P2285T

c.6853C>A

9 papers

NM_004385.5

p.F2301Y

c.6902T>A

2 papers

NM_004385.5

p.F2301C

c.6902T>G

1 paper

NM_004385.5

p.E2305_A2308del0

c.6915_6923del9