Varaico: Literature-Extracted Genetic Variants

VCAN

394 papers

RefSeq Summary

This gene is a member of the aggrecan/versican proteoglycan family. The protein encoded is a large chondroitin sulfate proteoglycan and is a major component of the extracellular matrix. This protein i...

Pfam Domains

V-setaa 27–148UCSCImmunoglobulin V-set domain

Xlinkaa 150–244UCSCExtracellular link domain

Xlinkaa 251–346UCSCExtracellular link domain

EGFaa 3093–3123UCSCEGF-like domain

EGFaa 3131–3161UCSCEGF-like domain

Lectin_Caa 3186–3291UCSCLectin C-type domain

Gene Aliases

HGNC Name

versican

HGNC Previous Symbol

CSPG2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

9 papers

NM_004385.5

p.F2301Y

c.6902T>A

Surrounding Variants

2 papers

NM_004385.5

p.F2301C

c.6902T>G

1 paper

NM_004385.5

p.E2305_A2308del0

c.6915_6923del9

2 papers

NM_004385.5

p.V2315L

c.6943G>C

2 papers

NM_004385.5

p.V2315L

c.6943G>T

1 paper

NM_004385.5

p.P2285T

c.6853C>A

1 paper

NM_004385.5

p.T2318A

c.6952A>G

1 paper

NM_004385.5

p.G2323C

c.6967G>T

1 paper

NM_004385.5

p.E2342_T2345del0

c.7026_7034del9

1 paper

NM_004385.5

p.V2346M

c.7036G>A

1 paper

NM_001164097.2

p.L1269P

c.3806T>C

NM_004385.5

p.L2256P

c.6767T>C

2 papers

NM_004385.5

p.T2353M

c.7058C>T

1 paper

NM_004385.5

p.D2354Y

c.7060G>T