Varaico: Literature-Extracted Genetic Variants

VCAN

394 papers

RefSeq Summary

This gene is a member of the aggrecan/versican proteoglycan family. The protein encoded is a large chondroitin sulfate proteoglycan and is a major component of the extracellular matrix. This protein i...

Pfam Domains

V-setaa 27–148UCSCImmunoglobulin V-set domain

Xlinkaa 150–244UCSCExtracellular link domain

Xlinkaa 251–346UCSCExtracellular link domain

EGFaa 3093–3123UCSCEGF-like domain

EGFaa 3131–3161UCSCEGF-like domain

Lectin_Caa 3186–3291UCSCLectin C-type domain

Gene Aliases

HGNC Name

versican

HGNC Previous Symbol

CSPG2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

3 papers

NM_004385.5

p.S2572L

c.7715C>T

Surrounding Variants

1 paper

NM_004385.5

p.E2565D

c.7695A>C

1 paper

NM_004385.5

p.E2565D

c.7695A>T

1 paper

NM_004385.5

p.D2581D

c.7743T>C

1 paper

NM_004385.5

p.G2592V

c.7775G>T

3 papers

NM_004385.5

p.E2624K

c.7870G>A

1 paper

NM_004385.5

p.V2627A

c.7880T>C

1 paper

NM_004385.5

p.V2510L

c.7528G>C

1 paper

NM_004385.5

p.V2510L

c.7528G>T

2 papers

NM_004385.5

p.E2637V

c.7910A>T

1 paper

NM_004385.5

p.G2638A

c.7913G>C

1 paper

NM_004385.5

p.G2638V

c.7913G>T

1 paper

NM_004385.5

p.S2639C

c.7916C>G