Varaico: Literature-Extracted Genetic Variants

VCAN

394 papers

RefSeq Summary

This gene is a member of the aggrecan/versican proteoglycan family. The protein encoded is a large chondroitin sulfate proteoglycan and is a major component of the extracellular matrix. This protein i...

Pfam Domains

V-setaa 27–148UCSCImmunoglobulin V-set domain

Xlinkaa 150–244UCSCExtracellular link domain

Xlinkaa 251–346UCSCExtracellular link domain

EGFaa 3093–3123UCSCEGF-like domain

EGFaa 3131–3161UCSCEGF-like domain

Lectin_Caa 3186–3291UCSCLectin C-type domain

Gene Aliases

HGNC Name

versican

HGNC Previous Symbol

CSPG2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_004385.5

p.K2698T

c.8093A>C

Surrounding Variants

1 paper

NM_004385.5

p.R2697H

c.8090G>A

1 paper

NM_004385.5

p.R2697C

c.8089C>T

1 paper

NM_004385.5

p.A2690S

c.8068G>T

1 paper

NM_004385.5

p.T2689T

c.8067G>A

2 papers

NM_004385.5

p.V2685I

c.8053G>A

1 paper

NM_004385.5

p.T2672N

c.8015C>A

1 paper

NM_004385.5

p.I2731L

c.8191A>C

3 papers

NM_004385.5

p.H2665L

c.7994A>T

NM_001164097.2

p.H1678L

c.5033A>T

1 paper

NM_004385.5

p.D2659D

c.7977T>C

1 paper

NM_004385.5

p.A2757D

c.8270C>A

1 paper

NM_004385.5

p.S2639C

c.7916C>G

1 paper

NM_004385.5

p.G2638A

c.7913G>C