Varaico: Literature-Extracted Genetic Variants

VCAN

394 papers

RefSeq Summary

This gene is a member of the aggrecan/versican proteoglycan family. The protein encoded is a large chondroitin sulfate proteoglycan and is a major component of the extracellular matrix. This protein i...

Pfam Domains

V-setaa 27–148UCSCImmunoglobulin V-set domain

Xlinkaa 150–244UCSCExtracellular link domain

Xlinkaa 251–346UCSCExtracellular link domain

EGFaa 3093–3123UCSCEGF-like domain

EGFaa 3131–3161UCSCEGF-like domain

Lectin_Caa 3186–3291UCSCLectin C-type domain

Gene Aliases

HGNC Name

versican

HGNC Previous Symbol

CSPG2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_004385.5

p.D2931Y

c.8791G>T

Surrounding Variants

1 paper

NM_004385.5

p.G2925E

c.8774G>A

13 papers

NM_004385.5

p.D2937Y

c.8809G>T

1 paper

NM_004385.5

p.E2919insFs

c.8755_8756insC

1 paper

NM_004385.5

p.M2913V

c.8737A>G

1 paper

NM_004385.5

p.I2960T

c.8879T>C

1 paper

NM_004385.5

p.E2965E

c.8895A>G

2 papers

NM_004385.5

p.D2895H

c.8683G>C

1 paper

NM_004385.5

p.S2891_L2892insA

c.8671_8675ins3

2 papers

NM_004385.5

p.Q2973H

c.8919G>C

2 papers

NM_004385.5

p.Q2973H

c.8919G>T

1 paper

NM_004385.5

p.Y2883*

c.8649C>A

1 paper

NM_004385.5

p.Y2883*

c.8649C>G