Varaico: Literature-Extracted Genetic Variants

VCAN

394 papers

RefSeq Summary

This gene is a member of the aggrecan/versican proteoglycan family. The protein encoded is a large chondroitin sulfate proteoglycan and is a major component of the extracellular matrix. This protein i...

Pfam Domains

V-setaa 27–148UCSCImmunoglobulin V-set domain

Xlinkaa 150–244UCSCExtracellular link domain

Xlinkaa 251–346UCSCExtracellular link domain

EGFaa 3093–3123UCSCEGF-like domain

EGFaa 3131–3161UCSCEGF-like domain

Lectin_Caa 3186–3291UCSCLectin C-type domain

Gene Aliases

HGNC Name

versican

HGNC Previous Symbol

CSPG2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

1 paper

NM_004385.5

p.E2965E

c.8895A>G

Surrounding Variants

1 paper

NM_004385.5

p.I2960T

c.8879T>C

2 papers

NM_004385.5

p.Q2973H

c.8919G>C

2 papers

NM_004385.5

p.Q2973H

c.8919G>T

13 papers

NM_004385.5

p.D2937Y

c.8809G>T

1 paper

NM_004385.5

p.P2996T

c.8986C>A

1 paper

NM_004385.5

p.T2998I

c.8993C>T

1 paper

NM_004385.5

p.D2931Y

c.8791G>T

1 paper

NM_004385.5

p.T3003M

c.9008C>T

1 paper

NM_004385.5

p.S3005C

c.9014C>G

1 paper

NM_004385.5

p.G2925E

c.8774G>A

3 papers

NM_004385.5

p.E3009K

c.9025G>A

1 paper

NM_004385.5

p.N3011K

c.9033C>A