Varaico: Literature-Extracted Genetic Variants

VCAN

394 papers

RefSeq Summary

This gene is a member of the aggrecan/versican proteoglycan family. The protein encoded is a large chondroitin sulfate proteoglycan and is a major component of the extracellular matrix. This protein i...

Pfam Domains

V-setaa 27–148UCSCImmunoglobulin V-set domain

Xlinkaa 150–244UCSCExtracellular link domain

Xlinkaa 251–346UCSCExtracellular link domain

EGFaa 3093–3123UCSCEGF-like domain

EGFaa 3131–3161UCSCEGF-like domain

Lectin_Caa 3186–3291UCSCLectin C-type domain

Gene Aliases

HGNC Name

versican

HGNC Previous Symbol

CSPG2

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

2 papers

NM_004385.5

p.G3089Splc

c.9265+1G>C

Surrounding Variants

8 papers

NM_004385.5

p.G3089Splc

c.9265+1G>A

4 papers

NM_004385.5

p.G3089Splc

c.9265+1G>T

1 paper

NM_004385.5

p.G3089R

c.9265G>A

1 paper

NM_004385.5

p.G3089R

c.9265G>C

7 papers

NM_004385.5

p.G3089Splc

c.9265+2T>A

1 paper

NM_004385.5

p.P3088T

c.9262C>A

1 paper

NM_004385.5

p.E3078E

c.9234G>A

1 paper

NM_004385.5

p.I3073T

c.9218T>C

1 paper

NM_004385.5

p.L3038I

c.9112C>A

1 paper

NM_004385.5

p.T3025T

c.9075G>A

1 paper

NM_004385.5

p.T3025M

c.9074C>T

1 paper

NM_004385.5

p.I3019L

c.9055A>C