Varaico: Literature-Extracted Genetic Variants

Gene:VIM
Variant:p.S49T

VIM

770 papers

RefSeq Summary

This gene encodes a type III intermediate filament protein. Intermediate filaments, along with microtubules and actin microfilaments, make up the cytoskeleton. The encoded protein is responsible for m...

Pfam Domains

Filament_headaa 6–101UCSCIntermediate filament head (DNA binding) region
Filamentaa 102–410UCSCIntermediate filament protein

Gene Aliases

HGNC Name

vimentin

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
1 paper
NM_003380.5
p.S49T
c.146G>C
Surrounding Variants
1 paper
NM_003380.5
p.R50_S51insFs
c.150_151insC
1 paper
NM_003380.5
p.T48delFs
c.144delC
1 paper
NM_003380.5
p.S51G
c.151A>G
1 paper
NM_003380.5
p.S51N
c.152G>A
1 paper
NM_003380.5
p.L52H
c.155T>A
1 paper
NM_003380.5
p.Y53N
c.157T>A
1 paper
NM_003380.5
p.Y53H
c.157T>C
2 papers
NM_003380.5
p.R45P
c.134G>C
1 paper
NM_003380.5
p.R45_P46insFs
c.135_136insC
1 paper
NM_003380.5
p.L44L
c.132G>C
1 paper
NM_003380.5
p.L44Q
c.131T>A
1 paper
NM_003380.5
p.L44L
c.130C>T
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."