Varaico: Literature-Extracted Genetic Variants

Gene:XRCC1
Variant:p.S485A

XRCC1

1,763 papers

RefSeq Summary

The protein encoded by this gene is involved in the efficient repair of DNA single-strand breaks formed by exposure to ionizing radiation and alkylating agents. This protein interacts with DNA ligase ...

Pfam Domains

XRCC1_Naa 1–149UCSCXRCC1 N terminal domain
BRCTaa 315–390UCSCBRCA1 C Terminus (BRCT) domain
BRCTaa 538–616UCSCBRCA1 C Terminus (BRCT) domain

Gene Aliases

HGNC Name

X-ray repair cross complementing 1

HGNC Previous Name

X-ray repair complementing defective repair in Chinese hamster cells 1

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
2 papers
NM_006297.3
p.S485A
c.1453T>G
Surrounding Variants
1 paper
NM_006297.3
p.S485F
c.1454C>T
7 papers
NM_006297.3
p.S485Y
c.1454C>A
1 paper
NM_006297.3
p.D484H
c.1450G>C
1 paper
NM_006297.3
p.D484N
c.1450G>A
1 paper
NM_006297.3
p.E483_D484insFs
c.1449_1450ins4
1 paper
NM_006297.3
p.D487G
c.1460A>G
1 paper
NM_006297.3
p.A482V
c.1445C>T
1 paper
NM_006297.3
p.A482S
c.1444G>T
2 papers
NM_006297.3
p.A482T
c.1444G>A
4 papers
NM_006297.3
p.T488A
c.1462A>G
1 paper
NM_006297.3
p.G481R
c.1441G>A
2 papers
NM_006297.3
p.N480N
c.1440T>C
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."