Varaico: Literature-Extracted Genetic Variants

ZNF408

129 papers

RefSeq Summary

The protein encoded by this gene contains ten tandem zinc fingers and an N-terminal SET domain, so it is likely a DNA binding protein that interacts with other proteins. In adults, the encoded protein...

Pfam Domains

PRDM2_PRaa 61–179UCSCPR domain zinc finger protein 2, PR domain

zf-C2H2aa 381–403UCSCZinc finger, C2H2 type

zf-C2H2aa 409–431UCSCZinc finger, C2H2 type

zf-C2H2aa 437–459UCSCZinc finger, C2H2 type

zf-C2H2aa 468–490UCSCZinc finger, C2H2 type

zf-C2H2aa 496–518UCSCZinc finger, C2H2 type

Gene Aliases

HGNC Name

zinc finger protein 408

HGNC Alias Symbols

FLJ12827; PRDM17

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

4 papers

NM_024741.3

p.A62_L63delFs

c.184_188del5

Surrounding Variants

1 paper

NM_024741.3

p.A62_G64delFs

c.186_190del5

1 paper

NM_024741.3

p.L63_P65delFs

c.188_194del7

1 paper

NM_024741.3

p.G60fs

c.178_179fs

4 papers

NM_024741.3

p.G64_S66delFs

c.192_196del5

1 paper

NM_024741.3

p.P65_S66delFs

c.194_198del5

3 papers

NM_024741.3

p.P65L

c.194C>T

1 paper

NM_024741.3

p.L67V

c.199C>G

1 paper

NM_024741.3

p.L54fs

c.160_161fs

1 paper

NM_024741.3

p.A53insFs

c.158_159insTT

1 paper

NM_001184751.2

p.G66W

c.196G>T

1 paper

NM_001184751.2

p.R41*

c.121C>T

1 paper

NM_001184751.2

p.T40_L49del10

c.118_146del30