Varaico: Literature-Extracted Genetic Variants

ZNF408

129 papers

RefSeq Summary

The protein encoded by this gene contains ten tandem zinc fingers and an N-terminal SET domain, so it is likely a DNA binding protein that interacts with other proteins. In adults, the encoded protein...

Pfam Domains

PRDM2_PRaa 61–179UCSCPR domain zinc finger protein 2, PR domain

zf-C2H2aa 381–403UCSCZinc finger, C2H2 type

zf-C2H2aa 409–431UCSCZinc finger, C2H2 type

zf-C2H2aa 437–459UCSCZinc finger, C2H2 type

zf-C2H2aa 468–490UCSCZinc finger, C2H2 type

zf-C2H2aa 496–518UCSCZinc finger, C2H2 type

Gene Aliases

HGNC Name

zinc finger protein 408

HGNC Alias Symbols

FLJ12827; PRDM17

Papers

RefSeq ID

Protein change

DNA change

Selected Variant

2 papers

NM_024741.3

p.R148Q

c.443G>A

Surrounding Variants

1 paper

NM_001184751.2

p.L145F

c.433C>T

1 paper

NM_024741.3

p.Y158_Q159insTT

c.472_476ins6

1 paper

NM_024741.3

p.Q159*

c.475C>T

1 paper

NM_024741.3

p.S131Splc

c.393-9G>T

1 paper

NM_024741.3

p.P171A

c.511C>G

1 paper

NM_024741.3

p.Q172E

c.514C>G

2 papers

NM_024741.3

p.P173L

c.518C>T

1 paper

NM_001184751.2

p.T173I

c.518C>T

1 paper

NM_024741.3

p.T181T

c.543C>T

4 papers

NM_024741.3

p.G184_E188del5

c.550_563del15

1 paper

NM_024741.3

p.G184A

c.551G>C

3 papers

NM_024741.3

p.G184_E188del0

c.552_563del12