Varaico: Literature-Extracted Genetic Variants

Gene:BTK
Variant:p.S553fs

BTK

1,389 papers

RefSeq Summary

The protein encoded by this gene plays a crucial role in B-cell development. Mutations in this gene cause X-linked agammaglobulinemia type 1, which is an immunodeficiency characterized by the failure ...

Pfam Domains

PHaa 4–133UCSCPH domain
BTKaa 141–170UCSCBTK motif
SH3_1aa 220–266UCSCSH3 domain
SH2aa 281–355UCSCSH2 domain
SH2aa 281–362UCSCSH2 domain
PK_Tyr_Ser-Thraa 402–651UCSCProtein tyrosine and serine/threonine kinase

Gene Aliases

HGNC Name

Bruton tyrosine kinase

HGNC Previous Symbols

AGMX1; IMD1

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
3 papers
NM_000061.3
p.S553fs
c.1657_1658fs
Surrounding Variants
1 paper
NM_000061.3
p.S553C
c.1657A>T
2 papers
NM_000061.3
p.S553R
c.1657A>C
2 papers
NM_000061.3
p.S553insFs
c.1657_1658insCA
3 papers
NM_000061.3
p.S553delFs
c.1657delT
2 papers
NM_000061.3
p.S553R
c.1659C>G
2 papers
NM_000061.3
p.S553R
c.1659C>A
1 paper
NM_000061.3
p.S554P
c.1660T>C
1 paper
NM_000061.3
p.T552P
c.1654A>C
1 paper
NM_000061.3
p.S554*
c.1661C>G
1 paper
NM_000061.3
p.S554*
c.1661C>A
26 papers
NM_000061.3
p.Y551F
c.1652A>T
7 papers
NM_000061.3
p.Y551H
c.1651T>C
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."