Varaico: Literature-Extracted Genetic Variants

Gene:PRKN
Variant:p.C253W

PRKN

4,125 papers

RefSeq Summary

The precise function of this gene is unknown; however, the encoded protein is a component of a multiprotein E3 ubiquitin ligase complex that mediates the targeting of substrate proteins for proteasoma...

Pfam Domains

ubiquitinaa 3–73UCSCUbiquitin family
zf-RING_12aa 145–217UCSCRING/Ubox like zinc-binding domain
zf-RING_12aa 145–217UCSCRING/Ubox like zinc-binding domain
zf-RING_14aa 228–318UCSCRING/Ubox like zinc-binding domain
IBR_2aa 411–459UCSCIBR domain

Gene Aliases

HGNC Name

parkin RBR E3 ubiquitin protein ligase

HGNC Previous Symbol

PARK2

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
7 papers
NM_004562.3
p.C253W
c.759C>G
Surrounding Variants
1 paper
NM_004562.3
p.C253C
c.759C>T
10 papers
NM_004562.3
p.C253F
c.758G>T
37 papers
NM_004562.3
p.C253Y
c.758G>A
1 paper
NM_004562.3
p.C253R
c.757T>C
1 paper
NM_004562.3
p.C253S
c.757T>A
6 papers
NM_004562.3
p.N254S
c.761A>G
2 papers
NM_004562.3
p.Q252H
c.756G>T
2 papers
NM_004562.3
p.Q252H
c.756G>C
2 papers
NM_004562.3
p.N254K
c.762C>A
1 paper
NM_004562.3
p.Q252*
c.754C>T
1 paper
NM_004562.3
p.Q252K
c.754C>A
1 paper
NM_004562.3
p.S255S
c.765C>A
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."