Varaico: Literature-Extracted Genetic Variants

Gene:TRIM5
Variant:p.Q139_V140Splc

TRIM5

152 papers

RefSeq Summary

The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil reg...

Pfam Domains

zf-RING_UBOXaa 15–56UCSCRING-type zinc-finger
zf-B_boxaa 90–131UCSCB-box zinc finger
SPRYaa 358–491UCSCSPRY domain

Gene Aliases

HGNC Name

tripartite motif containing 5

HGNC Alias Symbols

RNF88; TRIM5alpha

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
1 paper
NM_033034.3
p.Q139_V140Splc
c.417+8A>C
Surrounding Variants
1 paper
NM_033034.3
p.Q139_V140Splc
c.417+3A>G
28 papers
NM_033034.3
p.R136Q
c.407G>A
1 paper
NM_033034.3
p.A135G
c.404C>G
1 paper
NM_033034.3
p.E122E
c.366G>A
2 papers
NM_033034.3
p.R119Q
c.356G>A
4 papers
NM_033034.3
p.R119W
c.355C>T
20 papers
NM_033034.3
p.V112F
c.334G>T
2 papers
NM_033034.3
p.V112I
c.334G>A
1 paper
NM_033034.3
p.G110G
c.330G>A
7 papers
NM_033034.3
p.G110E
c.329G>A
10 papers
NM_033034.3
p.G110R
c.328G>C
10 papers
NM_033034.3
p.G110R
c.328G>A
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."