Varaico: Literature-Extracted Genetic Variants

Gene:SPOP

SPOP

535 papers

RefSeq Summary

This gene encodes a protein that may modulate the transcriptional repression activities of death-associated protein 6 (DAXX), which interacts with histone deacetylase, core histones, and other histone...

Pfam Domains

MATH_2aa 33–161UCSCMATH domain
BTBaa 190–297UCSCBTB/POZ domain
BACK_BPM_SPOPaa 301–353UCSCBPM/SPOP, BACK domain

Gene Aliases

HGNC Name

speckle type BTB/POZ protein

HGNC Alias Symbols

TEF2; BTBD32

Papers
RefSeq ID
Protein change
DNA change
1–12 of 378 variants
120 papers
NM_001007228.2
p.F133V
c.397T>G
89 papers
NM_001007228.2
p.F133L
c.397T>C
89 papers
NM_001007228.2
p.F133L
c.399C>G
89 papers
NM_001007228.2
p.F133L
c.399C>A
88 papers
NM_001007228.2
p.F102C
c.305T>G
78 papers
NM_001007228.2
p.W131G
c.391T>G
69 papers
NM_001007228.2
p.Y87C
c.260A>G
44 papers
NM_001007228.2
p.Y87N
c.259T>A
31 papers
NM_001007228.2
p.S119N
c.356G>A
28 papers
NM_001007228.2
p.F102V
c.304T>G
26 papers
NM_001007228.2
p.E50K
c.148G>A
23 papers
NM_001007228.2
p.R121Q
c.362G>A
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."