Varaico: Literature-Extracted Genetic Variants

Gene:TET2
Variant:p.R1896S

TET2

2,192 papers

RefSeq Summary

The protein encoded by this gene is a methylcytosine dioxygenase that catalyzes the conversion of methylcytosine to 5-hydroxymethylcytosine. The encoded protein is involved in myelopoiesis, and defect...

Pfam Domains

Tet_JBPaa 1290–1905UCSCOxygenase domain of the 2OGFeDO superfamily

Gene Aliases

HGNC Name

tet methylcytosine dioxygenase 2

HGNC Previous Symbol

KIAA1546

Papers
RefSeq ID
Protein change
DNA change
Selected Variant
13 papers
NM_001127208.3
p.R1896S
c.5688G>T
Surrounding Variants
13 papers
NM_001127208.3
p.R1896S
c.5688G>C
1 paper
NM_001127208.3
p.I1897fs
c.5689_5690fs
1 paper
NM_001127208.3
p.I1897insFs
c.5689_5690insTC
1 paper
NM_001127208.3
p.I1897L
c.5689A>C
5 papers
NM_001127208.3
p.R1896T
c.5687G>C
9 papers
NM_001127208.3
p.R1896M
c.5687G>T
1 paper
NM_001127208.3
p.R1896fs
c.5686_5687fs
12 papers
NM_001127208.3
p.R1896G
c.5686A>G
2 papers
NM_001127208.3
p.R1896W
c.5686A>T
1 paper
NM_001127208.3
p.R1896delFs
c.5688delG
1 paper
NM_001127208.3
p.I1897N
c.5690T>A
2 papers
NM_001127208.3
p.I1897T
c.5690T>C
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Regarding the variants extracted from papers and shown text snippets from research papers, the following holds: "Some rights reserved. This work permits non-commercial use, distribution and reproduction in any medium, provided the original author and source are credited."